Volume 24, Issue 1 (April & May 2021)                   J Arak Uni Med Sci 2021, 24(1): 50-61 | Back to browse issues page


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Pouryari Biyachal P, Ranji N, Nazemi A. Investigating GJB2 Mutation in 31 Individuals With Non-syndromic Hearing Loss. J Arak Uni Med Sci 2021; 24 (1) :50-61
URL: http://jams.arakmu.ac.ir/article-1-6383-en.html
1- Department of Genetics, Faculty of Biological Sciences, Tonekabon Branch, Islamic Azad University, Tonekabon, Iran.
2- Department of Biology, Faculty of Sciences, Rasht Branch, Islamic Azad University, Rasht, Iran. , n_ranji@iaurasht.ac.ir
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Extended Abstract

1. Introduction

Deafness is among the major sensory-neurological deficits; the World Health Organization (WHO) estimates that approximately 360 million individuals with mild to severe deafness live in the world. Deafness is a heterogeneous disorder, i.e., caused by environmental and genetic factors [1]. Despite the genetic diversity of deafness in different populations, the DFNB1 locus is the cause of approximately 50% of non-syndromic deafness [2]. The GJB2 gene is located at the DFNB1 locus and has two exons [1]; it produces a protein product called connexin 26 [2]. Connexin 26 acts as an essential regulator of potassium ion (K+) homeostasis in the inner ear. Without K+ exchanges, auditory cells fail to respond to sound responses [2]. This study aimed to evaluate GJB2 gene mutations by PCR-sequencing in 31 non-syndromic deaf individuals.

2. Materials and Methods 

In this descriptive cross-sectional study, a total of 85 unrelated deaf individuals from 85 families who were referred to Guilan General Welfare Office and Rasht Welfare Office, Rasht Deafness Center, and White Silence Deafness Center (in Anzali port) in Gilan Province, Iran, were identified. Among them, 31 patients with non-syndromic deafness and bilateral deafness, deafness from birth, and having one or more deaf relatives, ranging in age from 17 to 50 years were selected. Accordingly, the necessary blood samples were collected from them. After DNA purification, the entire length of the GJB2 gene was amplified by PCR. Besides, sequencing was performed with the reverse primer. The results of sequencing using CLC main workbench v3.5 software and online blast software (BLAST) were examined for mutations in deaf subjects, compared to the reference gene available at the NCBI site.
 Ethical considerations: With the permission of the Ethics Committee of the Islamic Azad University, Tonekabon Branch (Code: IR.IAU.TON.REC.1398.015) and with the consent of the deaf subjects or their parents, the sampling of deaf individuals was performed.

3. Results 

In this study, 31 non-syndromic deaf individuals (out of 85 deaf subjects) from Gilan Province were included; of them, 22(71%) and 9(29%) subjects were females and males, in sequence. The mean age of the examined deaf subjects was 33.33 years. In this study, 35 delG mutations in the GJB2 gene were detected in 16 patients (Table 1).



Of them, 14 patients were homozygous (Figure 1) and two patients were heterozygous (Figure 2). In one patient, the V153I mutation was observed as heterozygous. In one of two patients with a 35delG heterozygous mutation, the pathogenic variant of G200R was also observed as heterozygous (35delG/G200R).




4. Discussion and Conclusion

Approximately 52% of the explored deaf individuals from Rasht and Bandar Anzali deaf centers presented mutations in the GJB2 gene; the most common mutation among these individuals was 35delG mutation with a frequency of 48.38%. Moreover, 35delG mutation in some studies in Isfahan with a frequency of 6.12% [1], in the Kurdish population with an allelic frequency of 13.33% [14], in Qom with a prevalence of 61.9% [15], in Tabriz with a frequency of 39% [11], and Lorestan with a frequency of 9.4% [16] was reported. The present study was more similar to Tabriz and Qom data concerning the frequency of 35delG mutation. However, in some parts of Iran, including Kurdistan, Azerbaijan, Isfahan, and neighboring countries (Turkey & Pakistan), the prevalence of this mutation is lower.
The allelic frequency of V153I mutation in several studies was measured as follows: Fars Province: about 6% [4], Isfahan: about 2.04% [1], and Lorestan: about 2.8% [16]. The V153I mutation was reported as a common mutation in some studies; however, in the present study, it was reported in only one allele and may not be highly prevalent in deaf individuals in Gilan Province.
In two studies in Shanghai, China [19] and Iran, the G200R variant was introduced as a pathogenic variant [20]. The frequency of this pathogenic variant in Morocco was reported to be almost 0.66% [21]. In a study in Iran, this pathogenic variant was reported in two alleles with a frequency of 0.05%. This pathogenic variant is in the second quarter (TM4) [22]; its importance in pathogenicity remains unknown. Mahdieh et al. found a small frequency of this variant in more than 10 studies in Iran; however, only in Gilan Province, this pathogenic variant was observed in abundance in an allele.
Due to the high rate of mutation in the GJB2 gene in Rasht and Anzali Cities in Gilan Province, it can be expected that mutation in this gene is critical in the occurrence of deafness in these cities. Due to the high prevalence of 35delG mutation concerning the genetic screening of deafness in Guilan Province, it is necessary to study the GJB2 gene as the main gene affecting non-syndromic deafness.

Ethical Considerations

Compliance with ethical guidelines

This study was approved by the Ethics Committee of the Islamic Azad University, Tonekabon Branch (Code: IR.IAU.TON.REC.1398.015).

Funding

This study was extracted from MSc. thesis of the first author at the Department of Genetics, Faculty of Biological Sciences, Tonekabon Branch, Islamic Azad University, Tonekabon.

Authors' contributions

Conceptualization: Najmeh Ranji and Ali Nazemi; Research and sampling method: Pedram Pouryari Biyachal; Data Analysis, Text Writing, and Review: All Authors.

Conflicts of interest

The authors declared no conflicts of interest.

Acknowledgements

We thank the General Department of Welfare of Guilan Province, Welfare of Rasht City, Deaf Centers of Guilan Province located in Rasht and Bandar Anzali, and Mr. Sobhan Darvishi.

 

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Type of Study: Original Atricle | Subject: Basic Sciences
Received: 2020/07/13 | Accepted: 2020/10/26

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